Citation Policies


TBEV Analyzer should be referenced with the following citation:



TBEV Analyzer: a Platform for Evolutionary Analysis of Tick-borne Encephalitis Virus

Forghani, M., Kovalev, S., Vasev, P., & Bolkov, M. (2019, October). TBEV Analyzer: a Platform for Evolutionary Analysis of Tick-borne Encephalitis Virus. In 2019 International Multi-Conference on Engineering, Computer and Information Sciences (SIBIRCON) (pp. 0397-0402). IEEE.

DOI: 10.1109/SIBIRCON48586.2019.8958021

BibTeX: Click here.
@inproceedings{forghani2019tbev, title={TBEV Analyzer: a Platform for Evolutionary Analysis of Tick-borne Encephalitis Virus}, author={Forghani, Majid and Kovalev, Sergey and Vasev, Pavel and Bolkov, Mikhail}, booktitle={2019 International Multi-Conference on Engineering, Computer and Information Sciences (SIBIRCON)}, pages={0397--0402}, year={2019}, organization={IEEE} }



Fundamental Publications about Clusteron Structure


Reconsidering the classification of tick-borne encephalitis virus within the Siberian subtype gives new insights into its evolutionary history

Kovalev, S.Y., Mukhacheva, T.A. Reconsidering the classification of tick-borne encephalitis virus within the Siberian subtype gives new insights into its evolutionary history // Infection, Genetics and Evolution. – November 2017. – V.55. – p.159-165.

DOI: 10.1016/j.meegid.2017.09.014

BibTeX: Click here.
@article{kovalev2017reconsidering, title={Reconsidering the classification of tick-borne encephalitis virus within the Siberian subtype gives new insights into its evolutionary history}, author={Kovalev, SY and Mukhacheva, TA}, journal={Infection, Genetics and Evolution}, volume={55}, pages={159--165}, year={2017}, publisher={Elsevier} }


Clusterons as a tool for monitoring populations of tick-borne encephalitis virus

Kovalev S.Y., Mukhacheva T.A. Clusterons as a tool for monitoring populations of tick-borne encephalitis virus // Journal of Medical Virology, 2014. – V.86(2). – p. 283-289.

DOI: 10.1002/jmv.23732

BibTeX: Click here.
@article{kovalev2014clusterons, title={Clusterons as a tool for monitoring populations of tick-borne encephalitis virus}, author={Kovalev, Sergey Y and Mukhacheva, Tatyana A}, journal={Journal of medical virology}, volume={86}, number={2}, pages={283--289}, year={2014}, publisher={Wiley Online Library} }


Clusteron structure of tick-borne encephalitis virus populations

Kovalev S.Y., Mukhacheva T.A. Clusteron structure of tick-borne encephalitis virus populations // Infect Genet Evol. – 2013. – V.14(1). – p. 22-28.

DOI: 10.1016/j.meegid.2012.10.011

BibTeX: Click here.
@article{kovalev2013clusteron, title={Clusteron structure of tick-borne encephalitis virus populations}, author={Kovalev, Sergey Y and Mukhacheva, Tatyana A}, journal={Infection, genetics and Evolution}, volume={14}, pages={22--28}, year={2013}, publisher={Elsevier} }



Other Publications


Baltic lineage of tick-borne encephalitis virus: A putative evolutionary pathway

Kovalev, S.Y., Mukhacheva, T.A. Baltic lineage of tick-borne encephalitis virus: A putative evolutionary pathway // Ticks and Tick-borne Diseases. – 2016. – V.7. – p. 1209-1215.

DOI: 10.1016/j.ttbdis.2016.07.013

BibTeX: Click here.
@article{kovalev2016baltic, title={Baltic lineage of tick-borne encephalitis virus: A putative evolutionary pathway}, author={Kovalev, SY and Mukhacheva, TA}, journal={Ticks and tick-borne diseases}, volume={7}, number={6}, pages={1209--1215}, year={2016}, publisher={Elsevier} }


Unification of the molecular epidemiological research of the tick-borne encephalitis

Kovalev, S.Y., Mukhacheva, T.A. Unification of the molecular epidemiological research of the tick-borne encephalitis // Voprosy Virusologii, 2016, 61(2), pp. 89–95 (in Russian)

BibTeX: Click here.
@article{kovalev2016unification, title={Unification of the molecular epidemiological research of the tick-borne encephalitis}, author={Kovalev, SY and Mukhacheva, TA}, journal={Voprosy virusologii}, volume={61}, number={2}, pages={89--95}, year={2016} }


Tick-borne encephalitis virus subtypes emerged through rapid vector switches rather than gradual evolution

Kovalev S.Y., Mukhacheva T.A. Tick-borne encephalitis virus subtypes emerged through rapid vector switches rather than gradual evolution // Ecology and Evolution – 2014. – V.4 (22). – p. 4307-4316.

DOI: 10.1002/ece3.1301

BibTeX: Click here.
@article{kovalev2014tick, title={Tick-borne encephalitis virus subtypes emerged through rapid vector switches rather than gradual evolution}, author={Kovalev, Sergey Y and Mukhacheva, Tatyana A}, journal={Ecology and evolution}, volume={4}, number={22}, pages={4307--4316}, year={2014}, publisher={Wiley Online Library} }


Origin and distribution of tick-borne encephalitis virus strains of the Siberian subtype in the Middle Urals, the north-west of Russia and the Baltic countries

Kovalev S.Y., Chernykh D.N., Kokorev V.S., Snitkovskaya T.E. and Romanenko V.V. Origin and distribution of tick-borne encephalitis virus strains of the Siberian subtype in the Middle Urals, the north-west of Russia and the Baltic countries // Journal of General Virology. – 2009. – V. 90. – №12. – p. 2884-2892.

DOI: 10.1099/vir.0.012419-0

BibTeX: Click here.
@article{kovalev2009origin, title={Origin and distribution of tick-borne encephalitis virus strains of the Siberian subtype in the Middle Urals, the north-west of Russia and the Baltic countries}, author={Kovalev, S Yu and Chernykh, DN and Kokorev, VS and Snitkovskaya, TE and Romanenko, VV}, journal={Journal of general virology}, volume={90}, number={12}, pages={2884--2892}, year={2009}, publisher={Microbiology Society} }